Spatial Organ Atlas: Human Lymph Node
Explore the GeoMx WTA Human Lymph Node Data
See how imaging and molecular data combine to give you a comprehensive profile of the tissue architecture and biology through this Minerva Story.
Human Lymph Node Metadata
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Human Lymph Node Metadata
This cohort contains 5 samples:
- Sex: 1 Male and 4 Females
- Race: 4 White and 1 Asian
- Age Range: 44 years to 59 years
- BMI: Unknown
Whole Transcriptome Atlas Profiling:
- >18,000 genes
- 5μm FFPE tissue section
Area of Illumination (AOI) Profiling Strategy:
- 193 AOIs total
- Placed on key multicellular features
- Geometric polygons and segmented compartmentalization strategy
Morphology Markers:
- SMA – Fibroblasts (trabeculae)
- CD11c – Dendritic cells
- CD3E – T cells (T cell zone)
- CD20 – B cells (B cell zone)
- DNA – Nuclei
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