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  1. Materna, S.C. et al.  High accuracy, high-resolution prevalence measurement for the majority of locally expressed regulatory genes in early sea urchin development.  Gene Expression Patterns doi:10.1016/j.gep.2010.04.002 (2010).

  2. Dixit et al.  Peroxisomes Are Signaling Platforms for Antiviral Innate Immunity.  Cell 2010 May 6;doi:10.1016/j.cell.2010.04.018

  3. Nam, J., Dong, P., Tarpine, R., Istrail, S., Davidson, E.H.  Functional cis-regulatory genomics for systems biology.  Proc Natl Acad Sci U S A 2010 Feb 23;107(8):3930-5. Epub 2010 Feb 8.

  4. Smith, E.R., Cai, K.Q., Smedberg, J.L., Ribeiro, M.M., Rula, M.E., Slater, C., Godwin, A.K., Xu, X.X.  Nuclear entry of activated MAPK is restricted in primary ovarian and mammary epithelial cells.  PLoS One 2010 Feb 18;5(2):e9295.

  5. Ouellet, M. et al.  A rapid and inexpensive labeling method for microarray gene expression analysis.  BMC Biotechnology 2009 Nov 25;9(1):97. Epub ahead of print.

  6. Amit, I. et al.  Unbiased Reconstruction of a Mammalian Transcriptional Network Mediating Pathogen Responses.  Science 2009 Oct 9; Vol. 326. no. 5950, pp. 257-263.

  7. Palamanda, J.R. et al.  Evaluation of CYP1A1 and CYP2B1/2 m-RNA Induction in Rat Liver Slices Using the NanoString® Technology: A Novel Tool for Drug Discovery Lead Optimization.  Drug Metabolism Letters 2009 Aug;3(3):171-5. Epub 2009 Aug 1.

  8. Payton, J.E. et al.  High throughput digital quantification of mRNA abundance in primary human acute myeloid leukemia samples.  The Journal of Clinical Investigation 119(6): 1714-1726 (2009).

  9. Vladislav, M.A. et al.  Multiplexed measurements of gene signatures in different analytes using the NanoString nCounter Assay System.  BMC Research Notes 2: 80 (2009).

  10. Yi-Hsien Su et al.  A Perturbation Model of the Gene Regulatory Network for Oral and Aboral Ectoderm Specification in the Sea Urchin Embryo.  Developmental Biology 329: 410-421 (2009).

  11. Birtwell, S. et al.  Microparticle encoding technologies for high-throughput multiplexed suspension assays.  Integrative Biology 1: 227-436 (2009).

  12. Geiss, G.K. et al.  Direct multiplexed measurement of gene expression with color-coded probe pairs.  Nature Biotechnology 26: 317-25 (2008).  Download Supplemental Data.

  13. Garay, Jones,* et al.  Crosstalk Between PKA and Epac Regulates the Phenotypic Maturation and Function of Human Dendritic Cells.  The Journal of Immunology 2010; 185:3227-3238.

  14. D’Angelo, June A.,* et all. The Cystine/Glutamate Antiporter Regulates Dendritic Cell Differentiation and Antigen Presentation. The Journal of Immunology 2010; 185:3217-3226.


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